Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTASQHRKSDSAERDEVNVKNAPKVASEAEINRRNVVFAEALRCAC-IAMRVGDDPGYIWTPQRLGAGSFGTVTLA-YRHEGDAVWRKTAVKRISLRKEMRLSAVLEKVRCAGREVALCRRAGVSPHVVPMYEPWFDCREGVIALPMDAGDFSLEQYAVHCGFRFPPLVLLSMCAQCARAVAHLHRRGVVHRDVKPDNFVVNVFDTAGGAGAGGDGGRRDARAPLVRILDFGLACGVEEVGQELKRCVGTPHYMAPETFSHLCDCDVPAACDVWSLGVTLFRLATGVFPVFEMDKTWQQPPFTALHSGKLWLPSRNLFHEPLSAESLAVLSVAASMLVLDPRYRPTADAAVLQLQGFQEAFSHQIQSWPPGSGPQPCRVWKRTRK
4FIF Chain:A ((54-318))-------------------------------------VSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLV----AVKKMDLRKQQRRELLFNEV--------VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG-ALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT----------------HDGR---VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIMVIEMVDGEPPYF------NEPPLKAMKMIRDNLPPR---LKNLHKVSPSLKGFLDRLLVRDPAQRATA--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1283 -42636 -33.23 -162.11
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -33.23
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_4FIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FIF-query.scw
PDB file : Tito_Scwrl_4FIF.pdb: