Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVAQAIRNIISPKSVIAQYQKIDFSNKGTIPIRHLNIGFDGKEIDIEFYVNNQFATLFFATLSVFLTYGEDLVIETARHHR-EFIQD--PILKQRVTSLIGQEAIHSKLHNEFNDAIKELEYPVDLYRFLGENF--------FKYVFLK-----FPQPL-K--LSLMAGIEHFTAVLAEYMMKHEKNFYYTDDAKSRALWMWHMLEESEHKDIAYDVYQILNGNYPLRATGFLMAFITILGLIPTATLLVPVLRKPKELLTRKFWKDARRGVNLIFSPKDGVFGSTIGQIFDYLRPNFHPNDHDTTQYLEYYKNKLLNEGGAIAPYFVKEFTPPVRAVS
5DCS Chain:A ((75-231))-------------------------------------------------------------LVAGFSAGEEAVTLDILPMAHALARQGRLEDVLFLTTFMHDEAKHVEMFSRWQQAV---GIGQMDLSVFHNDHYKRIFYEALPEAMNRLYADDSPEAVIRAATVYNMIVEGTLAESGYYTFRQIYKKA-GLFPGLLQGIDYLNMDEGRHIQFGIYTIQRIV---------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5DCS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 431 -26737 -62.03 -193.74
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -62.03
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.232

(partial model without unconserved sides chains):
PDB file : Tito_5DCS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DCS-query.scw
PDB file : Tito_Scwrl_5DCS.pdb: