Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------MMNRKFAMGLALFSGLAFTHSLQA-ASFSCNAAKTTTELSICKN------------RSLNDADVKMATT----YQIVLHALPMGGRDNQKDTQQQWLKKRNACAANVSCISKAYQQRQKQLDTILQDRVLSHGPF----------------
1AOC Chain:A ((1-175))ADTNAPICLCDEPGVLGRTQIVTTEIKDKIEKAVEAVAQESGVSGRGFSIFSHHPVFRECGKYECR--TVRPEHSRCYNFPPFTHFKSECPVSTRDCEPVFGYTVAGEFRVIVQAPRAGFR--QCVWQHKCRFGSNSCGYNGRC-----TQQRSVVRLVTYN--LEKDGFLCESFRTCCGCPCRSF


General information:
TITO was launched using:
RESULT:

Template: 1AOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 184 -2622 -14.25 -24.50
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -14.25
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.175

(partial model without unconserved sides chains):
PDB file : Tito_1AOC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AOC-query.scw
PDB file : Tito_Scwrl_1AOC.pdb: