Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALFNSTSWAKYSVIAASLAGVMMLGGCAKKEEHTTTTLNIGYQKYGILPILKARGDLEKALKDQGVQVKWVEFPAGPQLLEGLNVGSVSLGEAGEAPPIFAQAANPNLVYVANQPAAPKAEALLVQKDSPIQSIKDLKGKRVALNKGSNVHYLLLKVLEANHLSLSDIQPVYLPPSDARAAFEKEAVDAWVIWDPFFAAAEHQIQARVLATGENLVSNHQFYLADRKFAENNPKVLNTVVQTLNQTTQWVSTHQDEAAKLLEKPTALEFDVLKTSISRMGFGVQPISDKVAQEQQYVADAFYAQKLIPNKLTIQEAILKLK
2O1M Chain:A ((110-147))----------------------------------------------------------------------------------------------------------------------------VLQNNDTIRGIEDLKGKRVITSATSNGALVLKKWNEDN----------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2O1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 49 -9146 -186.65 -240.68
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -186.65
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.780

(partial model without unconserved sides chains):
PDB file : Tito_2O1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2O1M-query.scw
PDB file : Tito_Scwrl_2O1M.pdb: