Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLLKVCTLLPCSLVIAACSVNSSSTPPTLSSSTPQVQKSSIEISCQDLQNPAYRQAVLNAINQIRQDSRQCGQ----QYF---SAAKPLSWNNNLYQGANAHSKDMANNNFLGHVGSTGLDLRARLKKYHMLSKANGENVASG---------QKTLNEVLAKWI----------------ASPLHCSNIMNPRYTEYAIACASDQSAKQRSYWTQQFAGF
3NT8 Chain:B ((33-178))--------------------------------------------------TDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQSCPSG----FAGIQ----------------GVAQNTMSWSSSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCG---TKLAVSCIYN--


General information:
TITO was launched using:
RESULT:

Template: 3NT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 259 4388 16.94 38.49
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : 16.94
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.394

(partial model without unconserved sides chains):
PDB file : Tito_3NT8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NT8-query.scw
PDB file : Tito_Scwrl_3NT8.pdb: