Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPQDQHLGVDKAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGLNPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLL-RARKLLMEKQEEDGSIKHI---------DLGMVGEVTGVKTDVLEMFTQSDFIPVIAPLGVDEKGNTYNINADLVAGKVAEALGAEKLILLTNISGVLDENKNLLTGLTTQEVDRLIETGVIYGGMIPKVGCALDAVKGGVVSAHIVDGRVPHATLLEIFTDHGVGTLISNRTQTTH
3L86 Chain:A ((39-261))-----------------------------IVIKIGGVA--SQQLSGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKD-----DMVL---VSHALLDLVGK-------------NLQEKLRQAGVSCQQLKSDIKHVVAADYLDKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVL-ENGAVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAGV------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3L86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1006 -2338 -2.32 -10.97
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -2.32
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_3L86.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L86-query.scw
PDB file : Tito_Scwrl_3L86.pdb: