Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVGTRHLIYVQHNNEYKVAKYGHWDGLDKNTFEVYQGFNKAPLDSSERFASITSPDSNEGYYQVKFLESFDLDNLPSEEDFIAQLEREKN
2KD2 Chain:A ((109-135))----------------------LRVVLEKDTMDVWCNGQKMET--AGEFVD---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2KD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 43 -2523 -58.66 -93.43
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -58.66
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_2KD2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KD2-query.scw
PDB file : Tito_Scwrl_2KD2.pdb: