Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVDKKAAMKRIAELTKSESWQEDKEIVAEVQKLGKSMWTEKPKRRTPRKIAIWHDDRILVTGTAEQLSEITGLSKNIIWDRARSLWIDSKGRQFRYVEER
1J9I Chain:B ((4-27))---------------------------------------------------------------NKKQLADIFGASIRTIQNWQEQGM--------------


General information:
TITO was launched using:
RESULT:

Template: 1J9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 47 -5052 -107.48 -210.48
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -107.48
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.607

(partial model without unconserved sides chains):
PDB file : Tito_1J9I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J9I-query.scw
PDB file : Tito_Scwrl_1J9I.pdb: