Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------PSDGPEAPEELCFTTIIRRRDGFKYAEKGPIGQKIAFLAGLNCTVQKGCKLA---CTPAHYGLKYKVSCRPA----------------------------------------------------------------------------------------------------------------------------
5HON Chain:A ((1-206))EEAKLTAHYSFDNNDLSDSTGNFGPGTITGNRIDNEGGTIAYAD-GKIG-KAAVLNG-----QSGIRLPDGLVSSNQYSVSLWVKPEQLTTHTTTFFGAKDPNHWISLVPQGWDGNTMLWSGSSPWYDGRTFWKIPTGQWTHLAFSVDNGAVKVYINGVEKFSGTNFPDVFTGANASFALGVNWWDPPFKGLIDELRIYEGALTPSQVTDLAQ


General information:
TITO was launched using:
RESULT:

Template: 5HON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 191 10079 52.77 162.56
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : 52.77
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.144

(partial model without unconserved sides chains):
PDB file : Tito_5HON.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HON-query.scw
PDB file : Tito_Scwrl_5HON.pdb: