Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRDYNCTTDDQLAWGIPSISHAWGLWALLGVVTVLLLISLAALLSQWTRGRRRNQEGQGPLSGRSAEEVPLYGNLHYLQTGRLSQEPRSEEQDPPSSGGLARGAEEAMCYTSLQLRPAQGRIPSSGNPIKYCEVVLDSEPKPQAPGPEPELYASVCAQTRRGRASFPDQAYANSQPAPS
1Z8Y Chain:J ((5-32))-------------------------TILAVASATVAMMIGVTVAVLCACLARR-------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Z8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 13 -3576 -275.04 -127.70
target 2D structure prediction score : 0.93
Monomeric hydrophicity matching model chain J : 0.59

3D Compatibility (PKB) : -275.04
2D Compatibility (Sec. Struct. Predict.) : 0.93
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_1Z8Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Z8Y-query.scw
PDB file : Tito_Scwrl_1Z8Y.pdb: