Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MKKSSILFIFILLLCIGLQYETIYYTDGSRSGAEYGLMGVSI---FLALFYMIPALYFLFRIGKKWELPKKVLILSLLGGMFLSGWLSSFANTYIHDLLGVLFPDSPFLNAFESAIVA-PLVEEPLKLLPLVFVLALIPVRKLKFLFLLGIASGLGFQMIEDIGYIRTDLPEGFDFTISRILERIISGIASHWTFSGLAVVGVYLLYRAYKGQKVGKKQGLIV------------
5IMU Chain:A ((4-220))AGAVSARAAEQQRLQRIVDAVARQEPRISWAAGLRDDGTTTLLVTDLAGGWIPPHVRLPANVTLLEPTARRRDAD---VIDLLGAVVAVAAHES--NTYVAEP----GPDAPALTGDRSARSAIPKVDE----FGPTLVEAVRRRDSLP-----RIAQAIALPAVRKTGVLENE-AELLHGCITAVKESVLKAYPSH----ELTAVGDWMLLAAIEALIDEQDYLANYHLAWYAVTTRRG


General information:
TITO was launched using:
RESULT:

Template: 5IMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 781 4550 5.83 23.21
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 5.83
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.238

(partial model without unconserved sides chains):
PDB file : Tito_5IMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IMU-query.scw
PDB file : Tito_Scwrl_5IMU.pdb: