Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSS-YKQL-DAGLTFSSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQR-FFALDTKLATLVGVGSSICGGSAIAATAPVIHAK--EKEV-AQAISVIFFFNVLAALIFPTLGTWLHLSNEGFALFAGTAVNDTSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQENKQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTNLVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF
4CZ8 Chain:A ((29-172))------------------------------ISYVPIFILTGLVIGPLLKLIPRDLAHEIFDFVRVFGLVIILFTEGHNLSWRLLKKNMPTIVTLDTIGLILTALIAGFIFKVVFNSSFLLGFLFGA---IIGATDPATLIPLFRQYRVKQDIETVIVTESIFNDPLGIVLTLIAISM---------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 357 -60694 -170.01 -439.81
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -170.01
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.143

(partial model without unconserved sides chains):
PDB file : Tito_4CZ8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CZ8-query.scw
PDB file : Tito_Scwrl_4CZ8.pdb: