Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKPEFLESAEFYNRRYHNFSSSVIVPMALLLVFLLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILVNHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQKKQLEYLQKSLQEGENHFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKIRDYQTAKSAIETGTSLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLATYRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELSLLAQKILEAESGKKVQGNLLDKGKITASEDGVLHLNPETSDSSMVAEGT--LLAQLYPSLEREGKAKLTAYLSSKDVARIKVGDSVRYTTTHDAGNQLFLDSTITSIDATATKTEKGNFFKIEAETNLTSEQAEKLRYGVEGRLQMITGKKSYLRYYLDQFLNKE
2F1M Chain:D ((54-297))----------------------------------------------TELPGRTSAYR-IAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAAN-----------------------------------------------------------------------IAQLTVNRYQKLLGTQYISK------------------------QEYDQALADAQ----------------------------------------------QANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSN-VTEGALVQNGQATALATVQQL----DPIYVDVTQS----------GKAKVSLITSDGIKFPQDGTLEFSDVTVDQT--TGSITLRAIFPNP---DHTMMPGMFVRARL-------------------


General information:
TITO was launched using:
RESULT:

Template: 2F1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 856 -14423 -16.85 -64.97
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain D : 0.60

3D Compatibility (PKB) : -16.85
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_2F1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F1M-query.scw
PDB file : Tito_Scwrl_2F1M.pdb: