Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRLEVYKNYQRLYDLRIAILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDR-------LAICYVRIGICTDDSKLIQKGSPFWS
3GW4 Chain:B ((105-176))--------------LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARD---


General information:
TITO was launched using:
RESULT:

Template: 3GW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 224 -12115 -54.08 -186.38
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.53

3D Compatibility (PKB) : -54.08
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.251

(partial model without unconserved sides chains):
PDB file : Tito_3GW4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GW4-query.scw
PDB file : Tito_Scwrl_3GW4.pdb: