Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKTAFLFAGQGAQYLGMGRDFYDQYPIVKETIDRASQVLGYDLRYLIDTEEDKLNQTRYTQPAILATSVAIYRLLQEKGYQPDMVAGLSLGEYSALVASGALDFEDAVALVAKRGAYMEEAAPADSGKMVAVLNTPVEVIEEACQKASELGVVTPANYNTPAQIVIAGEVVAVDRAVELLQEAGAKRLIPLKVSGPFHTSLLEPASQKLAETLAQVSFSDFTCPLVGNTEAAVMQKED-IAQLLTRQVKEPVRFYESIGVMQEAGISNFIEIGPGKVLSGFVKKIDQTAHLAHVEDQASLVALLEK
4RR5 Chain:A ((2-284))--KTAWVFPGQGSQAVGMGVDLLST-AIAKEKYQQAEEILGWSVVEKCQGDEASLALTQNTQPCLYVIEAILADLLRDKGFQPDYVAGHSLGEYSALYAAGVFDFATGLQLVKQRSEVM---ASASGGMMAALMKFDQTQLQQALTDNTE---VVLANDNSPEQVVISGTVAGVE---AILANVKARRAVPLKVSGAFHSSFMAQPSQSFAQTLTACHFNDATVPVLSNVDPSPTQNGDRLKEKLIQQMTGSVRWRETMVNLGEIGATDYWEVGPGKVLTGLCKRTCPDLNLKNI------------


General information:
TITO was launched using:
RESULT:

Template: 4RR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1648 -138152 -83.83 -489.90
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -83.83
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.590

(partial model without unconserved sides chains):
PDB file : Tito_4RR5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RR5-query.scw
PDB file : Tito_Scwrl_4RR5.pdb: