Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKILASLLLSTVMVSQVAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQVSAIQAEQSNLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTNGAVTSYINTIVNSKSITEAISRVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKATAEGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANTNLTAQVQAVSESAAAPVRAKVRPTYSTN--ASSYPIGECTWGVKTLAPWA----GDYWGNGAQWATSAAAAGFRTGSTPQVGAIACWND------GGYGHVAVVTAVESTTRIQVSESNYAGNRTIGNHRGWFNPTTTSEGFVTYIYAD
5T1Q Chain:A ((232-359))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSDEFKPFREVSDSMPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVVFEAGQFGADQHYGHVAFVEKVNSDGSIVISESNVKGLGIIS----HRTINAAAAEELSYITGK


General information:
TITO was launched using:
RESULT:

Template: 5T1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 501 -662 -1.32 -5.70
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -1.32
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_5T1Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T1Q-query.scw
PDB file : Tito_Scwrl_5T1Q.pdb: