Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFSGSSMSEQIFIQGPVGKIELFVDRPE--GEIKGFAVVCHPHPLQGGTPQHKVPALLTQIFNEYGCIVYRPSFRGLGGSEGVHDE--GHGETEDILAVIEHVRKLHAGLPFYAGGFSFGSHVLAKCHAQLSPELQPVQLILCGLPTATVVG-L-----------------R-HY----------------K--TP--EIQGDILLIHGEQDDITLLSDAIEWAKP-QKHPITILSGANHFFTGYLKQLRQIITRFIIMK
2WTN Chain:B ((8-247))---------------CDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSE-ER--HIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERD--IIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCYDHHLELVTEAVKEFMLE-


General information:
TITO was launched using:
RESULT:

Template: 2WTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1050 -51073 -48.64 -260.58
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -48.64
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_2WTN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WTN-query.scw
PDB file : Tito_Scwrl_2WTN.pdb: