Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence --------MKKQL-------PKISTTSKALAKS---LLLAQGVLDQAKKYSTLPFTQT---HII----LPRIDEKYYSWTHYGIFFPLLPEPHRYLNIMILIGTPGALAFDHDD----IITGNPRKTATFFSSTAALEQALLKAYIIPEDTKI------NKDGTLIELGQEISIQGKFPHIHINGHYDGFDFDFDIDITSHVS---WFIKTPIY-DHFSLLAKFKGFLNYQAKHIETQGL--CTYEYARAVGPHSITNKLIPDAYKLPLDFFTYQIINLNEATQLLLTKADIAGQTAAYTLHIRHLDQPAEIYTDVSFDIISHQVDDFVSPSGQKMR--LPKYFSWI-ARNDAKQIILNIQAEIDCPFRYGHGRGYASSYIFTGHYFGNEVQGRG-----YIEYV------------DIENPQAFEDE--------- 5LB8 Chain:D ((4-444)) PERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSK---LSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATAT-PQVQEDVFAALHLKKPVAIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKACGIVYCR---TREACEQLAIELSCRGVNAKAYHA-GLKASERTLVQNDWMEEKVPVIVATISFDKANVRF---VAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGCRHAAIAKYFGDALPACAKGCDHCQNPTAVRRRLEALERSSS

General information: TITO was launched using: RESULT: Template: 5LB8.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1743 -60888 -34.93 -171.03 target 2D structure prediction score : 0.35 Monomeric hydrophicity matching model chain D : 0.68 3D Compatibility (PKB) : -34.93 2D Compatibility (Sec. Struct. Predict.) : 0.35 1D Compatibility (Hydrophobicity) : 0.68 QMean score : 0.161

(partial model without unconserved sides chains): PDB file : Tito_5LB8.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5LB8-query.scw PDB file : Tito_Scwrl_5LB8.pdb: