Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ---------------------------------------------------------------------------------------MSHFQDKHVIHVDEQNQVIKFTRRNEIVECDHGRIQISKEDNEILCMDCNTKLNPVLWIAKYLDQLNQVTQRNNRMLAEVREIQAK---LEKKN---KFMCKHCHEVNTIDFKKLPSQAAVVRGMAVIDQEFDGMKVEHSR------------------------------------------------------------------------------------------------------------------ 5EQJ Chain:A ((4-461)) HHHSQDPMNALTTIDFNQHVIVRLPSKNYKIVELKPNTSVSLGKFGAFEVNDIIGYPFGLTFEIYYDIGKVRLLKYFTVEYLSSSNLLQFLIDK-----GDIQRVLDMSQESMGMLLNLANIQ---SEGNYLCMDETGGLLVYFLLERMFGGDNE-SKSKGKVIVIHENEHANLDLLKFANYSEKFIKEHVHTISLLDFFEPPTLQEIQSRFTPLPRALKGGKKNSYYRKLRWYNTQWQILELTGEFLYDGLVMATTLHLPTLVPKLAEKIHGSRPIVCYGQFKETLLELAHTLYSDLRFLAPSILETRCRPYQSIRGKLHPLMTMKGGGGYLMWCHRVIPA

General information: TITO was launched using: RESULT: Template: 5EQJ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 439 17601 40.09 139.69 target 2D structure prediction score : 0.44 Monomeric hydrophicity matching model chain A : 0.55 3D Compatibility (PKB) : 40.09 2D Compatibility (Sec. Struct. Predict.) : 0.44 1D Compatibility (Hydrophobicity) : 0.55 QMean score : 0.162

(partial model without unconserved sides chains): PDB file : Tito_5EQJ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5EQJ-query.scw PDB file : Tito_Scwrl_5EQJ.pdb: