Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------------------------------------------------------------MLKINDFPHDNN--------FWKVEWIGGVYNDIDGEPRIRIY---LAQIKSNI---ERQKTLYNS---SLEVRNQQNISSVHDVKIG----LIQFIPIGSVWKNGILDQSFTA--QYEQFNFNSDTPSEVCFQSQYGGIAETGLNNTTEWNNHLNDFHYRIVNSEARALGNYINVFYDYNGLSRIYIPSIVILQACYITSPKSARHIIFGQINKLLDPETSGFIDKETFRIHLHRDYKDIEA------PMIANLATNFNAKMGLRT-LRQSLVKESNITSISTPKRLKISFPFSNDFSI---KVKGKYIMENNKIYG----FFVTQIIEFSTKFDF-TKLVIFRKNSNQKGKEKAENLQNAYEGCNAVRPSHSESLDDKDESQPLIFTHDQ-----VSNQNLPQSIDFPLCSNISNLEVLKE-----------DKDIQYY---QNASYTNLNLRPSNTTSTGPAISSNNGVSELQIEPSLPVDL-----EYFF---------DVLEILNKLGYQFKSIAVNNSRDHPRGIINQFNRFIKNLHKW--HLQDDDQTPRPFIVAEM-IYKGAFYYLLDIA------PRKGAALSAQLIRAYTGEQITPTAFAILLNDVARTSP-----KGWSVLDHAKYSQKWQHFRIEHNRNNKP----ELVAKNIIKKLG----------------------------------------------
4ZUZ Chain:A ((8-864))DVIKFKEPERCDYLYVDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSAHSGVTKYSAEHQLSEYKRQLEEDIKAINSQKKISPHAYDDLLKEKIERLQQIEKYIELIQVLKKQYDEQNDIRQLRTGGIPQLPSGVKEIIKSSENAFAVRLSPYDNDKFTRFDDPLFNVKRNISKYDTPSRQAPIPIYEGLGYRLRSTLFPEDKTPTPINKKSLRDKVKSTVLSHYKDEDRIDGEKKDEKLNELITNLQNELVKELVKSDPQYSKLSLSKD-PRGKEINYDYLVNSLMLVDNDSEIGDWIDTILDATVDSTVWAVQASSPFYQGAKEISSDRDADKISIRVQYLL----AEANIYCKTNKLSDANFGEFFDKEPHATEIAKRVKEGFTQGADIEPIIYDYINSNHAELGLKSPLTGKQQQEITDKFTKHYNTIKES-PHFDEFFVADPDKKGNIFSHQGRISCHFLDFFTRQTKGKHPLGDLASHQEALQEGTSNRLHHKNEVVAQGYEKLDQFKKEVVKLLAENKPKELLDYLVATSPTGVPNYSMLSKETQNYIAYNRNWPAIQKELEKATSIPESQKQDLSRLLSRDNLQHDNLSAITWSKYSSKPLLDVELNKIAEGLELTAKIYNEKRGREWWFAGSRNEARKTQCEELQRVSKEINTLLQSESLTKSQ-VLEKVLNSIETLDKIDRDISAESNWFQSTLQKEVRLFRDQLKDICQLDKYYFKSTKLDEIISLEMEEQFQ--KIQDPAVQQIVRDLPSHCHNDEAIEFFKTLNPEEAAKVASYLSLEYREINKSTDKKTLLEQDIPRLFKEVNTQLLSKLKEEKAIDEQVHEKLSQLADKIAPEHFTRNNIIKWST


General information:
TITO was launched using:
RESULT:

Template: 4ZUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2628 155580 59.20 271.99
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 59.20
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_4ZUZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZUZ-query.scw
PDB file : Tito_Scwrl_4ZUZ.pdb: