Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIFTVSLHFARTVFNMRDIRCKRGCIMKKLFTILALCITVLTTSMASFADPPFDRGHGPKGPKGGPRGEWNDRGHKFDRDDNGDRVRDERRMREERGFERLKQHRWQPGYVMPQHYRGNGYKVDYKDNNLPKPDRNQQWYKINNDYILVDTDSNSIVSICGF
5AWW Chain:G ((1-75))-----------------------MDLLYTLVILFYLGVAGLLVYLVLVQEPK----QGAGDLMGGSADLFSARG------VTGGLYRLTVILGVVFAALALVIGLWPR------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5AWW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 104 -10380 -99.80 -138.39
target 2D structure prediction score : 0.96
Monomeric hydrophicity matching model chain G : 0.57

3D Compatibility (PKB) : -99.80
2D Compatibility (Sec. Struct. Predict.) : 0.96
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_5AWW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AWW-query.scw
PDB file : Tito_Scwrl_5AWW.pdb: