Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -------MQEFLIS--TSIVALAEMGDKTQLLALLLSACFRKPIPILIAILLATLINHGISAVLGQWITTVLSPAILVWVLAVGFIGMAFWMLIPDELDDETA---SINKWQKFGVFGATFILFFLA------EIGDKTQIATVALAARYDSIFWVMLGTTLGMMIANAPAVFIGNKLAERLSIALIHKIGAAIFFIVGVSTLVQHYFF 5KDM Chain:D ((3-201)) LDTVRYDYGHYLIMLGPFYAESSWAQAAVQTALELFSALYPAPCISGYAR------PPGPSAVIEHLGSLVPKGGLLLFLSH-----------LPDDVKDGLGTGPGMQQFVSSYFLNPACSNVFITVRQRGEKINGRTVLQALGRACDMAGCQHYVLGSTVPL-----GGLNFVNDLASPVSTAEMMDDFSP-FFTVEFPPI------

General information: TITO was launched using: RESULT: Template: 5KDM.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 737 -44852 -60.86 -276.86 target 2D structure prediction score : 0.31 Monomeric hydrophicity matching model chain D : 0.67 3D Compatibility (PKB) : -60.86 2D Compatibility (Sec. Struct. Predict.) : 0.31 1D Compatibility (Hydrophobicity) : 0.67 QMean score : 0.289

(partial model without unconserved sides chains): PDB file : Tito_5KDM.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5KDM-query.scw PDB file : Tito_Scwrl_5KDM.pdb: