Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------MTDITLKTPVEMRNVQLKVYDNTDNSILIDTQVASLTSYDIKL------PSTKLNRLYRIEVTTQGSSQVFD-----PTKSEYQNISGVYHAFITPSSISNKTQLI--SPSSEAIYQRAVIRSG-QLPNETIIPT--------RIEQLHVDLASQDVYRSLLNAFK---DTNIPSLSPASTLTILN--------LLKYSTTKPS-TYVDSYLCFGYLQYWSSIHNTNSPYQDLTQSLATDLKDGYLDGKKLIGDKTSFTPIFTSAPDNIDPAKNTLLDIAANQKVTRDYFATNLRAATFKLADLQDQSHLDPI--------GYDLLDKKQYSGIIPAGNTSEFFRIDGA---GDYRRAVGFSGITATCNGSAYPCKQGLTS-INI-----SDPK---LPATDYLVGHYEDSTTGCQLNFRANGQIELIKGSQSYRSALSADSTDKLLQTDAASYSYLLNSSSSEPNNSTQQYNFIQLHIKANKIVSAQAGLDSRKAPDVLQTTQLEYSFS
4PW2 Chain:A ((72-585))RYEEIDCLINDDATIKGRREGSEVYMPFSWMEKYFEVYGKVVQYDGYDRFEFSHSYSKVYAQREQYHPNGVFMSFEGYNVEVRDRVKCISGVEGVPLSTQWGPQGYFYAIQIAQYGLSHYSKNLTERPPHVEVYDTAEERSAWTVPKGCSLTRVYDKTRATSVREFSAPENSEGVSLPLGNTKDFIISFDLKFTSNGSVSVILETTEKGPPFVIHYVTTTQLILLKDRDITYGI--------GPRTTWTTVTRDLLTDLRKGIGLSNTKAVKATK------TMPRRVVKLVVHGTGTIDNITISTTSHMAAFYAASDWLVRNQDERGGWPIMVTRKLGEGFRALEPGWYSAMAQGQAMSTLVRAYLMTKDDRYLKAALRATGPFKLPSEQHGVKAVFMNKYDWYEEYPTIPSSFVLNGFIYSLIGLFDLAQTAGEKLGRDAGQLYSKGMESLKVMLPLYDTGSGTIYDLRHFILGTAPNLARWDYHTTHINQLQLLGTIDN--SPIFRDSVKRWKSYLKGGRAKHN--


General information:
TITO was launched using:
RESULT:

Template: 4PW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2267 63788 28.14 145.63
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 28.14
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.035

(partial model without unconserved sides chains):
PDB file : Tito_4PW2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PW2-query.scw
PDB file : Tito_Scwrl_4PW2.pdb: