Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATTNQLIRKGRTTLVEKSKVPALKACPQRRGVCTRVYTTTPKKPNSAMRKVCRVRLTSGFEVSSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDCAGVKDRNQSRSKYGAKRPKK
4K0K Chain:L ((2-123))--TINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKE


General information:
TITO was launched using:
RESULT:

Template: 4K0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 492 -33104 -67.28 -271.34
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain L : 0.93

3D Compatibility (PKB) : -67.28
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_4K0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K0K-query.scw
PDB file : Tito_Scwrl_4K0K.pdb: