Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVVDFSQLPPPNLIKELDFEQILAKRKERFISLFPTEQQLQWKEVLERESEPVTKLLEENAYMELILTNQINQDARALLLAFSSGSDLDHIAISYYGLKRLVITPANPNTVPPTAAVMETDENLKERCILSLSGLNTAGATNAYKFFAK-S-ADGRVADASIISHEDNPCFLDVYITQHDSTNYEASPDLINIVQKALDPEDVRPVGDRPTVHSSKAVPYQIQARLYISQTAE---NVMLLSVAKKRLEKYVENS-KKIGQSIRRSAIYAALH-VDGVSRVEILNLTSDIEISRSQHAFCTSLDIQIGGTE
3H2T Chain:B ((342-474))---------------------------------------------------------------------------------------------------------------------------------------------ATDYDTFVSERFGSI-IQAVQTFTDSTKPGYAFIAAKPKS-G-LYLTTVQREDIKNYL--KDYNLAPITPSIISPNYLFIKTNLKVTYALNKLQESEQWLEGQIIDKIDRYYTEDVEIFNSSFAKSKMLTYVDDADHS---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3H2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 360 11102 30.84 88.11
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : 30.84
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.345

(partial model without unconserved sides chains):
PDB file : Tito_3H2T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H2T-query.scw
PDB file : Tito_Scwrl_3H2T.pdb: