Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNQEIVVILGNADKRDWHFILVQLFFQLLGRRDRLFKTYFRFNKIQDNPFRIMNLMLLIFIVLWLGYINHDFLISSFSSLGIFTFFYYQNIPMKYLLKRMFLIGCGLLVAFVLGILSTYVLWLEPFAVALVAFSSRFVLRLFHISKPGGLFFAMLSAMGTSMQLPIAQLPIVSLYFFMGVVFALIAAVITKLLDSRPEQTIEKATLKERFHEEPLVIIDSVFYSAALFLSVYVSHGLNLHNPYWLTLSCASILLAENLDAMKHRQVQYLIGSMGGLCVSA-----FLSFVPFTQLQTIFLITFLYGIAQFLVARNYAVANIFLNPMALMLSTLIRGAYLISLIEYRFLGIVIGSFIGLGVAWVMTVGLQHYLTVVRQKLE
4R8G Chain:E ((5-332))-----RRQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAK-RKWAAQTIRRLIRGFILRH------SPRCPENAFFLDHVRASFLLNLR--------RQLPRNVLDTS--WPTP------PPALREASELLRELCMKNMVWKYCRSISPEWKQQLQQKAVASEIF-KGKKDNYPQSVPRLFISTRLGTEEISPRVLQSLGSEPI--------QYAVPVVKYDRKGYK-PRPRQLLLTPSAVVIVE--DAKVKQRIDY--ANLTGISVSSLSDSLFVLHVQKQKGDVVLQSDHVIETLTKTALSADRVNNININQGSITFAGGPGRDGIIDFTS--------------GSELLITKAKNGHLAVVAPRL-


General information:
TITO was launched using:
RESULT:

Template: 4R8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1056 -103296 -97.82 -323.81
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain E : 0.60

3D Compatibility (PKB) : -97.82
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.138

(partial model without unconserved sides chains):
PDB file : Tito_4R8G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R8G-query.scw
PDB file : Tito_Scwrl_4R8G.pdb: