Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKKEIVLTAAMMLFSMVASTTFVSATEVYPKEYNTEGTITFEAGDEGVTPPVDPENPDPNKPVDPSDPPSPGTGGALSIDYGSKFKFGTQK--------ISTADKTYYAAADVMNDGSRKPTYVQVTDRRSTLSGWKLSVSQPEQFKTASGDELVGAQLKFTKGQAVSLVDPTYTPQTVNSELTLTPGGNNTLAINAKSGTGVGTWVYRFGANENENQDAVQLSVPGKSVKLAQQYSTKLVWTLEDTPNN
1FUG Chain:A ((84-156))-----------------------------------------FDANSCAVLSAIGKQSPDINQGVDRADPLEQGAG-----DQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGT------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1FUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 58 3057 52.71 47.03
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : 52.71
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_1FUG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FUG-query.scw
PDB file : Tito_Scwrl_1FUG.pdb: