Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKLSFKDYLFIGSMLFGLFFGAGNLIFPVHLGQEAGAATFWANLGFLVTGIGLPFLGVIAIGVSKSSGVYELAKR-INQTYAMVFTILLYLVIGPFFALPRLATTSFEIGLAPFIDPSRQTLYLAIFSIVFF---VLAWWFSRKPTKILDYVGKFLNPAFLVLLGALLLLAFLNPLGSVNQAPIQPNYQEHAFFTGFTQGYNTLDALAALAFGIIIVTTIQNMGVTKPAEIAKDTIKSGAISIILMGIIYTLLAYLGAMSLGSFALSENGGITLAQIADHYLGTYGSILLAFIVILACLKTGIGLITAFAETFTDLFPQRNYAFFVALASILPCLAANVGLTNIIQFSLPVLMFIYPLAMTLILLVLVGPLFKQRTAVYRMTTYFTLIASIFDGLNACPETIKQTPIVQNLLYVAESYLPFFKLGMGWIVPAVIGFVIGLIWSFAKKEEVAD
5M8K Chain:A ((35-191))-----TLLAYSGPGALVAVGYMDPGNWSTSITGGQNFQYLLLSIIVISSLLAMLLQNMAAKLGIVC-QLDLAQAIRARTSRRLGFIFWILTELAI--MATDIAQVIGAAIALY-LLFK-----IPIFLAVVITVLDVFLLLLLNRIGFRKIEALVVCLIFVILFVFLYQII-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5M8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 273 -41209 -150.95 -269.34
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -150.95
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.056

(partial model without unconserved sides chains):
PDB file : Tito_5M8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5M8K-query.scw
PDB file : Tito_Scwrl_5M8K.pdb: