Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESVYRQERKSNRKKGQMMIQKTRVMLYVNDVEMICRFFVEKIGAEISETIELPEEFKSIVLSI---SKELELGVFPKVFVQKFSPEVLGPPPSLVFFTDEFETIYENMEEPG------EITDNNGILTFNFSDPEGNYFVIGKAESSD
2P25 Chain:A ((8-119))-----------------------HVAINASNYQATKNFYVEKLGFEVLRENHRPEK-NDIKLDLKLGSQELEIFISDQFPARPSYPEALG-LRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDG------------


General information:
TITO was launched using:
RESULT:

Template: 2P25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 277 -14911 -53.83 -144.77
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -53.83
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.375

(partial model without unconserved sides chains):
PDB file : Tito_2P25.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2P25-query.scw
PDB file : Tito_Scwrl_2P25.pdb: