Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIKSYTSIWAVEKVIYAINDFQLPFPVTFNQMAWFVLSLLFVIVFAHVPPLSMIEEVFLKYLGIPVAVTWFMSQKTFDGKKPLGFLRSFISYHLRF---KVTFAGKKVKEQKKRWDEPSTLVRSVNYVSD
3GGQ Chain:A ((60-96))----------------------------------------------------------------------SLDWTKVTLDGRPLSTIQQHSKTFFVLPLRGKLSFWE-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 48 -7900 -164.58 -232.35
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -164.58
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.264

(partial model without unconserved sides chains):
PDB file : Tito_3GGQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GGQ-query.scw
PDB file : Tito_Scwrl_3GGQ.pdb: