Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNEMMHRPVVKEELLDFMRTQQKKLPGELGKLEEEAHVAEVPV--IPHETVVFLKFLLGQLQPERILEIGAAIGFSSSVMATTIGENAHVTTIDRFDVMIEKAKKNYERLGLTDKVTLLEGQAADILP--ELSGPYDFIFMDSAKSKYIEFLPECLRLLRKGGVLMVDDIFQGGTILLPDEEIPRGKRAIHRKLNEFLRVVMDHPDLTSTIL-PLG----DGVILMTKESETIEL
3TFW Chain:B ((6-224))-------MQQQWSAVDNYLIKALIPGDPVLDRVLENNHRAGLPAHDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQS-----ADERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDGFTLAWVNA-----


General information:
TITO was launched using:
RESULT:

Template: 3TFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1007 6875 6.83 32.74
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : 6.83
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_3TFW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TFW-query.scw
PDB file : Tito_Scwrl_3TFW.pdb: