Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNKVILSISLAAALLFAAGCSANNTTSSSSSTESSKSTSTAESTTASSVDLNALELPQLTKDVAENEDLVEMVTNKGTIKIKLFPEYAPKAVENF--MTHAKDGY-YNGLTFHRVIKDFMIQGGD-PKGDGTGGESIWGEGFETEINNHLYNIRGALSMARSQDPNSNGSQFFIVQNTDDMHDGLLKDDYPQAIIDAYKNGGYPSLDGHYTVFGQVIEGMDVVDAIANIETDSSDKPKEEVKIDKINILQEAKQK
4N1P Chain:A ((18-142))------------------------------------------------------------------------------GRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANA-GPNTNGSQFFICTAKTEW------------------------LDGKHVVFGKVKEGMNIVEAM-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4N1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 577 25317 43.88 209.23
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 43.88
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.386

(partial model without unconserved sides chains):
PDB file : Tito_4N1P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N1P-query.scw
PDB file : Tito_Scwrl_4N1P.pdb: