Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKRKKLALSLIAFWLTACLVGCASWIDRGESITAVGSTALQPLVEVAADEFGTIHVGKTVNVQGGGSGTGLSQVQSGAVDIGNSDVFAEEKDGID----ASALVDHKVAVAGLALIVNKEVDVD---NLTTEQLRQIFIGEVTNWKEVGG---------KDLPISVINRAAGSGSRATFDTVIMEGQS---A--------------MQSQEQDSNGAVKSIVSKSPGAISYLSLTYIDD----SVKSMKL-----NGYDLSPENI-----------------------SSNNWPLWSYEHMYTLGQ-----PNELAAEFLNFVLSDETQEGIVKGLKYIPIKEMKVEKDAAGTVTVLEGRQ 1PC3 Chain:B ((24-343)) ---------------------------SSPVTLAETGSTLLYPLFNLWGPAFHERYPNVTITAQGTGSGAGIAQAAAGTVNIG----ASDAYLSEGDMAAHKGLMNIALAISAQQVNYNLPG-VSEHLKLNGKVLAAMYQGTIKTWDDPQIAALNPGVNLPGTAVVPLHRSDGSGDTFLFTQYLSKQDPEGWGKSPGFGTTVDFPAVPGALGENGNGGMVTGCAETPGCVAYIGISFLDQASQRGLGEAQLGNSSGNFLLPDAQSIQAAAAGFASKTPANQAISMIDGPAPDGYPIINYEYAIVNNRQKDAATAQTLQAFLHWAITDGNKASFLDQVHFQPLPPAVVKLSDA----------

General information: TITO was launched using: RESULT: Template: 1PC3.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1262 20675 16.38 82.70 target 2D structure prediction score : 0.59 Monomeric hydrophicity matching model chain B : 0.67 3D Compatibility (PKB) : 16.38 2D Compatibility (Sec. Struct. Predict.) : 0.59 1D Compatibility (Hydrophobicity) : 0.67 QMean score : 0.387

(partial model without unconserved sides chains): PDB file : Tito_1PC3.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1PC3-query.scw PDB file : Tito_Scwrl_1PC3.pdb: