Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTESTTPKFAIPELPMQIQTIRQYLPHRYPFLLVDRVTEVTDN-SIIGYKNVSINEEFLQGHFPEYPIMPGVLIVEALAQVSGVLGFI----MNNETPKPGSLFLFAGAERVRFKKQVVAGDQLVLKSELVMQKRGIYKYNCTASVDGIVAATAEIMISHQKTEQA
3D04 Chain:F ((14-151))-----------------IEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVY-FMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAEL----------


General information:
TITO was launched using:
RESULT:

Template: 3D04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 563 -45679 -81.13 -343.45
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain F : 0.80

3D Compatibility (PKB) : -81.13
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_3D04.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D04-query.scw
PDB file : Tito_Scwrl_3D04.pdb: