Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDIQGIKEALPHRYPMLLVDRVLEV-SEDTIVAIKNVTINEPFFNGHFPQYPVMPGVLIMEALAQTAGVLELSK-----PE-NKGKLVFYAGMDKVKFKKQVVPGDQLVMTATFVKRRGTIAVVEAKAEVDGKLAASGILTFAIGN
3D04 Chain:B ((14-151))---IEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAEL------


General information:
TITO was launched using:
RESULT:

Template: 3D04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 535 -22758 -42.54 -173.73
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -42.54
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_3D04.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D04-query.scw
PDB file : Tito_Scwrl_3D04.pdb: