Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKELHINTILAQAGIKSDEATGALVTPLHFSTTYQHPEFGR--------------STGFDYTRTKNPTRSKAEEVLAAIESADYALATSSGMSAIVLAF-SVFPVGSKVLAVRDLYGGSFRWFNQVEQE--GRFHFTY-ANTEEELIA----ELE-KDVDVLYIETPTNPLMLEFDIEKLAKLAHAK------GAKVVVDNTFYSPIYQRPIEDGADIVLHSATKYLAGHNDVLAGVVVTNSLELYEKLFYNLNTTGAVLSPFDSYQLLRGLKTLSLRMERSTANAQEVVAFLKDSPAVKEVLYT------------------GRGGMISFKVADE-TRIPHILNSLKVFSFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLRQALEG
5IJG Chain:B ((14-426))--HLLHPETQMLNYGYDSELSEGAVKPPVFLTSTFVFKTAEDGRDFFDFVSGRKEP---LVYSRFNHPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLFAFVRPGDVILHSQPLYGGTETLLAKTFFNFGVEAVAFADGVHEATIEKAAEEALAKGRVSVILIETPANPTNSIVDVAAVRRVAEKIEARQGSRPVIACDNTLLGPVFQKPLDHGADLSVYSLTKYVGGHSDLIAGAVLGA-KSVVRQVKALRGAIGTQLDPHSCWMLGRSLETLGLRMERADSNARAIAEFLRNHPKVEKLHYLPFADERSDIAALFKRQCTGAGSTFSFDIKGGQAAAFRFLNALQILKLAV---GTESLASHPAA-------VDVRERIGVLESTIRLSIGIEHPDDLIADLAQALDA


General information:
TITO was launched using:
RESULT:

Template: 5IJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1753 -21181 -12.08 -60.86
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -12.08
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_5IJG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IJG-query.scw
PDB file : Tito_Scwrl_5IJG.pdb: