Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFRAMANKKLLICAAIAAGLLLTACVKKETPKEEEQDKVETAVSEPQPQKPAKFESLESVDTQETQVQEQPQVEVHREETANTTTEIRRETRPARSDESSQTQVAEQPKSETPKVEPKPEKKPEPKAEPKPEKAQSKPAAKATEPANTEDDAVAAAIAAATPALKN
5E6F Chain:A ((2-145))---------TIICSVDIGIKNPAYTIFRYEDSKVSLIAIEKSDWSDNWEYNVTKDLTKYNPD----------IIVLEKQGYRSPNAKIIYFIKGFFYNTNTSVIVRN------------------PTFQGGSYSDRKKQSVITFMDKLSKLDDIADSFNLGIAYIES


General information:
TITO was launched using:
RESULT:

Template: 5E6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 586 -29749 -50.77 -228.83
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -50.77
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.290

(partial model without unconserved sides chains):
PDB file : Tito_5E6F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5E6F-query.scw
PDB file : Tito_Scwrl_5E6F.pdb: