Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRNHICNIGGKNVGKPIISFDQVVKRYDDETVLKKVSFEIEQGKFYTLLGPSGCGKTTILRIIAGFTEATEGDIYFEGKRLNDL------PANKRQVNTVFQDYALFPHMNVFDNVAFGLKIKKMSKSDIEKKVKDALRMVQLPGYEKREISEMSGGQRQRVAIARAIVNEPKVLLLDEPLSALDLKLRTDMQYELRDLQQRLGITFIFVTHDQEEALAMSDEIFVMNKGKIVQSGTPVDIYDEPINHFVADFVGES--NIVDGVMIEDNLVEFVGKQF-------ECVDGGMRLNEPVEVVLRPEDLTITTP------DKGKLVVTVDTQLFRGVHYEIICYDEQQNEWMVH--STKKAKEGSKVGLAFEPEDIHVMRFNESEEEFDARLDSYEE
2D62 Chain:A ((5-373))----------------AEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQIYIEDNLVADPEKGVFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDKRVREVAEMLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNTFVAGFIGSPPMNFLDATITDDGFLDFGEFKLKLLQDQFEVLEEENMVGKEVIFGIRPEDVHDASFTHIDVPEENTVKATVDIIENLGGEKIVHLR-RGNISFTAKFPKESKVREGDEVSVVFDMKKIHIFRKDTEKA-----------


General information:
TITO was launched using:
RESULT:

Template: 2D62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1699 26178 15.41 75.66
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : 15.41
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_2D62.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2D62-query.scw
PDB file : Tito_Scwrl_2D62.pdb: