Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSASVNNLDGKLDLVDITALSAAYEPEEVLGEGTYGIVFRARNKATGAKYAIKKLRLDGFSEGVPATTIREATLLHDLNDNPNVVKLLDVVCSDHRVYLVFELLDEDLRSFIKRYRPVSGQKPTNGTAVPLHLVREFTRQILYALWTCHNNRILHRDLKPGNILVANYRSKNGETKFYVKLADFGLARMFEMSVQTYTHEVMTLWYRSPEIILGDRHYTPAADVWSVGCIVAEMILGYSLFRGENWRDQLDKVFYVVGTPTEQTWPGVTKLPGYDRNFKVYHVAPLPTRLRDYDEKAVEFIAYLLVTNPKLRPTIPEILEHPFMKDA
1GIH Chain:A ((4-288))-----------------------FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--------PSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD---------ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI--------NTEGAIKLADFGLA--------------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-


General information:
TITO was launched using:
RESULT:

Template: 1GIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1237 -179745 -145.31 -683.44
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -145.31
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_1GIH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GIH-query.scw
PDB file : Tito_Scwrl_1GIH.pdb: