Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTVLPPKINVPATPALDGVDINSLYDVNHGKLLGKGGFSEVLAVRHIPSGEIRALKVMMRSSLVGKKAEMVAHEKEILRRTCHPAIITLHEAVQTPDKVYFALDLMNE-DLFEFIVRNKTVNEDLSRAIMHQLMSGIAYLHEQSIVHRDIKPENILINVVVKSEANNAANDDSESATRVEGLQVMSDINSIPLEKLNVEVKIADFGLAKVVMEWD-VCSTPCGTSFYIAPEVIRGIEEQGAKPLCTNQRLVKSVDVWSAGVVFYVLLCGRPPFHGQVRTGQDRRDLLRRIDHGVLFNPNHGWDSISAEAKNLILKMLDQESSKRITSDEVLRHPFFTAHGYSRPVPASDARRRFMQMQQLSLRTKVPAAQSAEAQVKTMSPLSGPDGQQIKVSSSGGGSSSKGSSNSTGSFLSSIKDFFGHRSKHTSDISKEERQRMHAELAELQATVIAEEDQEGDVTSYKPSMPVKEAKPARTAVMNMKAKVGPDALRK
2JAM Chain:A ((15-264))------------------------------EVLGSGAFSEVFLVKQRLTGKLFALKCIKKS--------SLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLT--------------------------------PEE--NSKIMITDFGLSK--MEQNGIMSTACGTPGYVAPEVL------AQKPYS------KAVDCWSIGVITYILLCGYPPFYEETES-----KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1044 -57612 -55.18 -238.07
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -55.18
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_2JAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAM-query.scw
PDB file : Tito_Scwrl_2JAM.pdb: