Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWYWGDISREEVNEKLRDTPDGTFLVRDASSKIQGEYTLTLRKGGNNKLIKVFHRDGHYGFSEPLTFCSVVDLINHY
5ITD Chain:B ((39-131))WYWGDISREEVNEKLRDTADGTFLVRDAST----DYTLTLRKGGNNKLIKIF--------SDPLTFSSVVELINHY


General information:
TITO was launched using:
RESULT:

Template: 5ITD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 192 -25229 -131.40 -394.20
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.94

3D Compatibility (PKB) : -131.40
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.717

(partial model without unconserved sides chains):
PDB file : Tito_5ITD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ITD-query.scw
PDB file : Tito_Scwrl_5ITD.pdb: