Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILIVEDEEMIREGVSDYLTDCGYETIEAADGQEALEQFSSYEVALVLLDIQMPKLNGLEVLAEIRKT-SQVPVLMLTAFQDEEYKMSAFASLADGYLEKPFSLSLLKVRVDAIFKRYYDTGRIFSYKDT----KVDFESYSASLAGQEVPINAKELEILDYLVKNEGRALTRSQIIDAVWKATDEVPFDRVIDVYIKELRKKLDLD--CILTVRNVGYKLERK
1YS7 Chain:A ((30-231))----------------------SGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVW-GYDFA-DTNVVDVFIGYLRRKLEAGPRLLHTVRGVGFVLR--


General information:
TITO was launched using:
RESULT:

Template: 1YS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 883 -69563 -78.78 -362.31
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -78.78
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_1YS7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YS7-query.scw
PDB file : Tito_Scwrl_1YS7.pdb: