Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MNAPVNVQQELMPVPASMREIDRKRYLWMISPAL---------PVI--GLGILAGYHFGPCPLK-KVFALGGPLLLHVVIPAIDTIIGKDARNPTDEEIKLLEKDPYYSRLVKSFIPLQYAANIYACYLTSRKDTSFLDKILLGISMGAINGIAINTAHELSHKHDRIDHI-LSHLALVPTGYNHFRIEHPYGHHKRAATPEDPASSRMGETFYEFWPRTVIGSFKSAIEIEKNRLKRKGKEFWSLDNELLQGWGMSAAFHASMVGIFG---KGTIPYLATQAF-YGISLFEIINYIEH--YGLLRQNKENGQYERTMPEHSWNNNNVVTNLFLYQLQRHSDHHAYPTRPFQALRHFDEAPELPSGYASMLLPAMIPSWWFKMMDKRVFDHYKGDLNKANISPKRRAKIFKKFGVVDKSLEATQAE
5LEV Chain:A ((9-404))PMPLLINLIVSLLGFVATVTLIPAFRGHFIAARLCGQDLNKTSRQQIPESQGVISGAVFLIILFCFIPFPFLPHHEFVALIGALLAICCMIFLGFADDVLNL-------RWRHKLLLPTAASLPLLMVYFTNFGNTTIVVHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQSLVISASIIVFNLVELEGDCR--------DDHVFSLYFMIPFFFTTLGLLYHN--------------WYPSRVFVGDTFCYFAGMTFAGVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETED--GEFTECNNMT--LINLLLKVLGPIHERNLTLLLLLLQILG----SAITFSIRYQLVR---------------


General information:
TITO was launched using:
RESULT:

Template: 5LEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1758 -151729 -86.31 -427.40
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -86.31
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.181

(partial model without unconserved sides chains):
PDB file : Tito_5LEV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LEV-query.scw
PDB file : Tito_Scwrl_5LEV.pdb: