Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISYEKTDMNHGTFPVFDGHND--VLTRLWLSDHNNPAQAFIQEGLAGHLDLKRCQQAGFVGGMF-AIFLPPFHYVKQHHPNKLFDQDASDFTQQQIEHICLAQLDLAKQLAE-YSNDIQICTTVQDIQHCLTQQKLAIILHMEGAEALQHNPDLLDVFYDAGLRSIGPLWNRPSRFGHGLNAKFPHSPDTGAGLTNEGKAFIKRCADKKMVIDVSHMNERAFWDTANILQQPIVATHSNVHALCPQARNLTDNQLKAIKDSKGIVGLNFDVAFLRKDGQRDAN-TSIEVLLEHLEYLIDQMGENHVGFGSDFDGALISHE-IEDVRGLHLLIEAMQKRHYSNEIIEKICFSNWLTVLNRILDK
5LX1 Chain:A ((30-356))-------------VPLIDGHNDFPYMIRGWFRNDINGQDAHLYDMPIGQTDLQRLQK-GLLGGQFWSAFVPC-----PKNPDK-------EVGSLEALRQTLQQLDVIHRLIERHPTILQFADSAASIWSSFRAGRVASLIGIEGLHQIADSVSALRMLHRLGVRYVTLTHNCHNAFADAATV----SPELHGGLSRKGERLIRELNRMGMMIDLSHTSHEAQTQALRLSRAPVIYSHSSIYSLRAHARNVTDENLHLLHRNRGVVM----ICFLRELLASEADQATLAHVIDHIIYAGTRIGYEHVGIGSAFDGMLRGPDGLHDVSCYPALVAGLLERGVSEEDVKRVMGLNVIRVLEEV---


General information:
TITO was launched using:
RESULT:

Template: 5LX1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1988 -9877 -4.97 -30.77
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -4.97
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_5LX1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LX1-query.scw
PDB file : Tito_Scwrl_5LX1.pdb: