Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------MMTEQKSALSLRYFLN-----------LEESQDGFGLVTFGKKQFTRFLTPVISIAIIIWG--------------LYLGF-SGVGRYYVALGVFFLVM---QGLMRYWLLPMMFK----RQFVRYQFGKSEQGIDLYQDYFE----FYAAGRK---QAVQYSEVQTFAKGKLTYMLELKNK----TVIIVPKRAFAQASDQTIFENTFKK
1E42 Chain:A ((26-258))GGYVAPKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILKN


General information:
TITO was launched using:
RESULT:

Template: 1E42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 639 -28171 -44.09 -169.70
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -44.09
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.164

(partial model without unconserved sides chains):
PDB file : Tito_1E42.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1E42-query.scw
PDB file : Tito_Scwrl_1E42.pdb: