Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNYRHHFHAGNFADVMKHVLLLQLLNRLNAKDKPYRYIDTHGGAGKYDLSQAPAQKSGEFLTGIHRLVQLSGMEKRQAPEAIQQYLKLVEELRAQEGKGSYPGSPWFALQGMREIDKATIFEMQRDVFQQLRHNIHD---KRAGLHERDAYEGLLAVIPPKEKRGLVMIDPPYELERKD---------FPQLVELLQSAYKKWPTGVFAVWYPIKDRAMIERFEKKMFKTGIRRQLICEICVWPDDTPVGLNGCGLLVINPPWQFSEQADQALQWLFPHLRMQETGGHAAVRWLVGE
1WXX Chain:C ((211-329))----------------------------------------------------------------------------------------------ERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAK-GKKDVERAYRAYKEVNLRAIKLLK--EGGILATASCSHH---------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1WXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 443 -10575 -23.87 -98.83
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.59

3D Compatibility (PKB) : -23.87
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_1WXX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WXX-query.scw
PDB file : Tito_Scwrl_1WXX.pdb: