Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNIYQFEAELLVGDIKQFADYKGKVLLIVNTASKCGFTPQ-FAGLEKLYEKYKDLGLEVLGFPCNQFGGQDPGSNKEIGTFCQRNYGVKFPMFAKVDVKGPEAHVIFRYLTREAKGILGSSTIKWNFTKFLVGKDGSVLNRYAPTTKPEALEADIEKALAS
3CYN Chain:A ((24-174))INSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSK-----KEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDI------


General information:
TITO was launched using:
RESULT:

Template: 3CYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 768 -11417 -14.87 -76.11
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -14.87
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_3CYN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CYN-query.scw
PDB file : Tito_Scwrl_3CYN.pdb: