Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHRLSKIYTRTGDSGTTGLGDGSRVAKDDLRIAALGDVDELNAIIGVLRAQI-TDSQVANKADWDKSLSLIQHWLFDLGGEVCIP------NYNLLQPVCIEFLEKEIDCMNEDLPMLKEFILPSGSLSCSYAHQARAVCRRAERSLMSVQSCDQNIQATALQLLNRLSDWLFVASRALQRAEGGQEVLWQKNINEMI
3GAH Chain:A ((8-187))------KIYTKNGDKGQTRIIGKQILYKNDPRVAAYGEVDELNSWVGYTKSLINSHTQVLS-----NELEEIQQLLFDCGHDLATPADDERHSFKFKQEQPTVWLEEKIDNYTQVVPAVKKHILPGGTQLASALHVARTITRRAERQIVQLMREEQ-INQDVLIFINRLSDYFFAAARYANYLEQQPDMLYR-------


General information:
TITO was launched using:
RESULT:

Template: 3GAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 718 -42444 -59.11 -245.34
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -59.11
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_3GAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GAH-query.scw
PDB file : Tito_Scwrl_3GAH.pdb: