Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMRRLSTQDQNFKQVFAELLAFETVNDPNLVQTVDQIIADVRQHGDDHVLKLTQQFDRHPAHQFSDLELSQQQLKAAFDGLNQEIREALQLAADRIRTFHEAQKQDSWTYVDDLGNTLGQKVTPLDRVGIYVPGGLASYPSSVLMNAVPAHVAGVPEIIMVVPAPNGELNPLVL-----AAAYLAGVSRV-FTIGGAQAVAALAYGTQTVPRVDKITGPGNRFVAA-AKRAVFG-QLGIDMIAGPSEILVYAEGVNNAEWLAMDVLSQAEH---DTVAQ-AIFITPDG--A-LLEAVESAI-EKHLNEL-----------PKAEIA-RTSIENRGALVLVKDRAEAVDLINQVAPEH-LELCLDDAE---AMSQDIRHAGAIFMGRYTPEAIGDYCAGPNHVLPTSGT--ARF--SSPLGVYDFQKRSSLIMCSKDGVKTLAKTADVLAVQENLDAHARSARYRYQ
2H5G Chain:B ((131-434))------------------------------------------------------------------------------------------------------------------NLELEQVTVPIGVLLVIFESR--PDCLP--QVAALAIASGNGLLLKGGKEAA--HSNRILHLLTQEALSIHGVKEAVQLVNTREEVE-------LDKMIDLIIPRGSSQLVRDIQKAAKGIPVM-GHSEGICH--MYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTF--VKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHV-DSACVFWNASTRFSDGY----RFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRG---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2H5G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1267 -21162 -16.70 -81.39
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -16.70
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.240

(partial model without unconserved sides chains):
PDB file : Tito_2H5G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H5G-query.scw
PDB file : Tito_Scwrl_2H5G.pdb: