Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNQIPLKPQNERFTDDQWQAIFDQGDNLLVSASAGSGKTTVLVRRVIEKLKMGFDIDELLIVTFTEAAAREMKERIQEALQEAVNSESDPVRRQHFTKQLVLLPTANISTLHAFCLTVIRRYYYLIDIDPVFRMLTDETETILMKEDVWDELREALYAENDERFFQLTMNFSNDRSDDGLTNLVFSLYEFARANPDPKKWLEQLSDNYRLPEGLAKSRLYQEQIRPLVLADIYQCVQLYEQMTQLAQGEGLEKMHEQVAGEQQQIKNIYEAFSQDRLEEAYAGLEQLTFSTFKSSRKAELKEISNEVKGMRDKAKKLIQQISKSYFPVSPSQMEELTDKALPLVEEMTKVTQSFMDGFSMRKREKGVLDFNDLEHLALQILTEKTKDAWLPSEA----SKHYRKKFKEVMVDEYQDVNQLQEAIL--YWLREPDDTKGNMFMVGDVKQSIYSFRLADPSLFIGKYENFSKKEGGRRIVLAENFRSRKEVLSFTNLIFEQLMDP---------AVGQINYDEAAKLIQGFSDFPENEQFEPEIMIYEKEQEESEI-----------EIPTDDILEDKTEGE-LFMTGLKIRQLIDSSFMIYDKKSKKSRPIEYKDIVLLTPTKKNNLTILEIFKTLDIP-LEMKDAQNYFQATEIRTMISLLQLIDNPYQDIPLAAVLRSPIVGLIEPELASIRLADRAHTYYDAVLAYQASNEDELAAKLEHFGKQLEHWRELARRSSITDLLWDIYYETGYLEYVVGLPAGAQRQANLYALVDRAKAYEQSSFRGLYQFVRFI-EKMQEKDKDLAEPVISIEDNA--VRVMTIHASKGLEFPVVFLLDMTKEFNLQD---LRNRYAFEEKLGAGIRYMDPETRVLYDTLPFQAIKLVKQNKLLSEEMRKLYVGLTRAEQKLFIVGSYKNKEQMIQTWSEAADHEELVFDPALRLKGRSSLMNWIGYGLIRHPEMQKYLEEEISTSLLQHSNAQFSISWMNQQSIIEQRQLLAEKELVNLDQQMKEDETLLADSLQKRLAYEYPYQASSQTTSYQSVSEIKRLFEDPDDTQESRLTLESSQNKAASRQFRYTQEQLAEPKFLQKDRQVSAAAVGTATHALLQLLPLEMPTTESIHQKLQELVRKRLVDEKVAKKVDVSSIIWFFQTELGQQLIANKENVKREQPFSMLLPADEVFQDYPNQEDELLIHGIVDGYLEEKDHLNIYDFKTDFILHPDDPAEIDAIVQKYQGQLRLYQQAMSEALNKPVENVFLILLRVKQIININK
5LD2 Chain:B ((329-775))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITRALAEIRETVAREKRRRGELGFDDM----LSRL-----DSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETA---LLLIGDPKQAIYAFRGADIFTYMK-----ARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFV-----FKGETQ--PAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNG------------------DDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHA---WDVVV------------------EEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQE-AGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITN-FRVQEQAFYHDRHSFEAVLD-------------LNAAP-ESVDLAEAER-LAEDLRLLYVALTRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5LD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1369 36677 26.79 88.81
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : 26.79
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.362

(partial model without unconserved sides chains):
PDB file : Tito_5LD2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LD2-query.scw
PDB file : Tito_Scwrl_5LD2.pdb: